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University Research Computing Facility Workshop
University Research Computing Facility Workshops
INTRODUCTORY SEQUENCE
Linux
Workshop Outline
What is Linux?
Shell Specifics
Navigating Files and Directories
Working With Files and Directories
File Permissions and Atrributes
Pipes and Redirection
Loop
Shell Scripts
Workshop Conclusion
Research Computing on Picotte
Introduction
Accessing the Picotte Cluster
The structure of the Picotte Cluster
Storage on Picotte
Running an interactive job on Picotte
Transferring files to and from Picotte
Running a batch job
Jupyter Hub service to the Picotte Cluster
R
Introduction to R
Introduction to R
Basics of R
Data Structures
Vectors, Matrices, Lists and Data Frames
Control Structure
Functions
Parallel Computing in R
More on dataframe
Visualization in R
PYTHON
Introduction to Python Programming
Python Fundamentals
Analyzing Patient Data
Visualizing Tabular Data
Storing Multiple Values in Lists
Repeating Actions with Loops
Analyzing Data from Multiple Files
Making Choices
Creating Functions
Errors and Exceptions
Defensive Programming
Debugging
Command-Line Programs
Index
